EcoCommons written support material, species distribution models explained and platform guides
These written descriptions on how to use the EcoCommons platform, the descriptions of the variety of species distribution models (SDM) available and the how to design and run and SDM have proven very popular with students whose instructors are using EcoCommons to teach basic SDM. They also...
Keywords: Species Distribution Modelling, Ecology, EcoCommons
EcoCommons written support material, species distribution models explained and platform guides
https://support.ecocommons.org.au/support/home
https://dresa.org.au/materials/ecocommons-written-support-material-species-distribution-models-explained-and-platform-guides
These written descriptions on how to use the EcoCommons platform, the descriptions of the variety of species distribution models (SDM) available and the how to design and run and SDM have proven very popular with students whose instructors are using EcoCommons to teach basic SDM. They also provide useful references for anyone using the platform.
https://www.ecocommons.org.au/contact/
Species Distribution Modelling, Ecology, EcoCommons
ugrad
masters
mbr
phd
EcoCommons use case estimating % of suitable habitat impacted by bushfires & utility of HCAS
We compare a variety of ways of estimating the percentage of suitable habitat impacted by the massive bushfires in eastern Australia (2019-2020), by comparing different SDM modelling algorithms, and inclusion of the Habitat Condition Assessment System (HCAS) derived variable.
Models were run...
Keywords: Species Distribution Modelling, HCAS, Fire, Ecology, EcoCommons
EcoCommons use case estimating % of suitable habitat impacted by bushfires & utility of HCAS
https://www.ecocommons.org.au/how-australian-mega-fires-impacted-the-superb-lyrebird-and-greater-sooty-owl/
https://dresa.org.au/materials/ecocommons-use-case-estimating-of-suitable-habitat-impacted-by-bushfires-utility-of-hcas
We compare a variety of ways of estimating the percentage of suitable habitat impacted by the massive bushfires in eastern Australia (2019-2020), by comparing different SDM modelling algorithms, and inclusion of the Habitat Condition Assessment System (HCAS) derived variable.
Models were run using the EcoCommons point-and-click SDM tools, and overlayed with a burnt area map https://researchdata.edu.au/google-earth-engine-map-geebam/1441550 to estimate % of suitable habitat that was impacted. HCAS data available: https://doi.org/10.25919/5j5j-4p06
https://www.ecocommons.org.au/contact/
Species Distribution Modelling, HCAS, Fire, Ecology, EcoCommons
Ecoacoustics & EcoCommons Generalised Dissimilarity Modelling (GDM) use case
This example highlights how data collected with passive acoustic monitoring (PAM) can be used to examine spatial variation in species composition.
This example draws from an R package developed to make GDM more accessible: https://github.com/EcoCommons-Australia/community-modelling
Keywords: Generalised Dissimilarity Modelling, Ecoacoustics, EcoCommons
Ecoacoustics & EcoCommons Generalised Dissimilarity Modelling (GDM) use case
https://openecoacoustics.org/resources/use-cases/gdm/
https://dresa.org.au/materials/ecoacoustics-ecocommons-generalised-dissimilarity-modelling-gdm-use-case
This example highlights how data collected with passive acoustic monitoring (PAM) can be used to examine spatial variation in species composition.
This example draws from an R package developed to make GDM more accessible: https://github.com/EcoCommons-Australia/community-modelling
https://openecoacoustics.org/contact/
Generalised Dissimilarity Modelling, Ecoacoustics, EcoCommons
Species Distribution Modelling in R
This set of scripts and videos provide an introduction to running SDMs in R and include some steps to consider that go beyond what's available in the EcoCommons SDM point-and-click tools.
Five videos include: 1. An introduction to SDM in R, 2. occurrence data, 3. environmental data, 4. fitting...
Keywords: Species Distribution Modelling, Ecology, R software, EcoCommons
Species Distribution Modelling in R
https://www.ecocommons.org.au/educational-material4-mastering-species-distribution-modelling-in-r/
https://dresa.org.au/materials/species-distribution-modelling-in-r
This set of scripts and videos provide an introduction to running SDMs in R and include some steps to consider that go beyond what's available in the EcoCommons SDM point-and-click tools.
Five videos include: 1. An introduction to SDM in R, 2. occurrence data, 3. environmental data, 4. fitting your model, 5. model evaluation
Scripts and files are available here:
https://github.com/EcoCommons-Australia/educational_material/tree/main/SDMs_in_R/Scripts
Scripts for all four modules are here: https://www.ecocommons.org.au/wp-content/uploads/EcoCommons_steps_1_to_4.html
https://www.ecocommons.org.au/contact/
https://orcid.org/0000-0002-1359-5133
Species Distribution Modelling, Ecology, R software, EcoCommons
ugrad
mbr
phd
Discovering Species Distribution Modelling with BCCVL
A set of 10 videos that provide an excellent introduction to species distribution modelling. These modules include: 1. Introduction to SDM, 2. Ecological theory of SDM, 3. Data for SDMs, 4. Design an SDM, 5. Presence only models, 6. Statistical models, 7. Machine learning models, 8. Model...
Keywords: Species Distribution Modelling, Ecology, EcoCommons, Beginer ecological modelling, Climate projections
Discovering Species Distribution Modelling with BCCVL
https://www.ecocommons.org.au/educational-material2-discovering-species-distribution-with-bccvl/
https://dresa.org.au/materials/discovering-species-distribution-modelling-with-bccvl
A set of 10 videos that provide an excellent introduction to species distribution modelling. These modules include: 1. Introduction to SDM, 2. Ecological theory of SDM, 3. Data for SDMs, 4. Design an SDM, 5. Presence only models, 6. Statistical models, 7. Machine learning models, 8. Model evaluation, 9. SDMs and climate change projections, 10. Case studies in BCCVL
https://www.ecocommons.org.au/contact/
BCCVL
Species Distribution Modelling, Ecology, EcoCommons, Beginer ecological modelling, Climate projections
ugrad
mbr
EcoCommons Modelling Made Easy
These ten videos walk users through some of the point-and-click functionality available on the EcoCommons platform including: 1. Navigating the EcoCommons platform, 2. Exploring environmental and climate grids available on the platform, 3. Importing your own data, 4. How to run a Species...
Keywords: Species Distribution Modelling, Climate projections , EcoCommons, Ecology
Resource type: video
EcoCommons Modelling Made Easy
https://www.ecocommons.org.au/educational-material-1-ecocommons-modelling-made-easy/
https://dresa.org.au/materials/ecocommons-modelling-made-easy
These ten videos walk users through some of the point-and-click functionality available on the EcoCommons platform including: 1. Navigating the EcoCommons platform, 2. Exploring environmental and climate grids available on the platform, 3. Importing your own data, 4. How to run a Species Distribution Model (SDM), 5. Predicting how distributions will change under climate change, 6. Running simple (averaged) ensemble models of SDMs, 7. An introduction to toy species trait problems that highlight how variation in species traits can be predicted spatially, 8. An introduction to Biosecurity Risk Mapping, 9. How to run SDMs for multiple species, 10. A multiple species SDM use case
support@ecocommons.org.au
Species Distribution Modelling, Climate projections , EcoCommons, Ecology
ugrad
mbr
phd