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Contributors: Laughlin, Greg (type: Editor)  or Hogg, Carolyn (type: Superv... 


WEBINAR: Getting started with command line bioinformatics

This record includes training materials associated with the Australian BioCommons webinar ‘Getting started with command line bioinformatics’. This webinar took place on 22 June 2021. 

Bioinformatics skills are in demand like never before and biologists are stepping up to the challenge of...

Keywords: Bioinformatics, Command line, Workflows, Bash, Computational biology

WEBINAR: Getting started with command line bioinformatics https://dresa.org.au/materials/webinar-getting-started-with-command-line-bioinformatics-248027d1-0773-485a-b511-831e2fd4cc64 This record includes training materials associated with the Australian BioCommons webinar ‘Getting started with command line bioinformatics’. This webinar took place on 22 June 2021.  Bioinformatics skills are in demand like never before and biologists are stepping up to the challenge of learning to analyse large and ever growing datasets. Learning how to use the command line can open up many options for data analysis but getting started can be a little daunting for those without a background in computer science. Parice Brandies and Carolyn Hogg have recently put together ten simple rules for getting started with command-line bioinformatics to help biologists begin their computational journeys. In this webinar Parice walks you through their hints and tips for getting started with the command line. She covers topics like learning tech speak, evaluating your data and workflows, assessing computational requirements, computing options, the basics of software installation, curating and testing scripts, a bit of bash and keeping good records. The webinar will be followed by a short Q&A session. The slides were created by Parice Brandies and are based on the publication ‘Ten simple rules for getting started with command-line bioinformatics’ (https://doi.org/10.1371/journal.pcbi.1008645). The slides are shared under a Creative Commons Attribution 4.0 International unless otherwise specified and were current at the time of the webinar. Files and materials included in this record: Event metadata (PDF): Information about the event including, description, event URL, learning objectives, prerequisites, technical requirements etc. Index of training materials (PDF): List and description of all materials associated with this event including the name, format, location and a brief description of each file. Getting started with command line bioinformatics - slides (PDF): Slides presented during the webinar Materials shared elsewhere: A recording of the webinar is available on the Australian BioCommons YouTube Channel https://youtu.be/p7pA4OLB2X4 Melissa Burke (melissa@biocommons.org.au) Hogg, Carolyn (type: Supervisor) Bioinformatics, Command line, Workflows, Bash, Computational biology
ARDC Research Data Rights Management Guide

A practical guide for people and organisations working with data, about rights information and licences, and to raise awareness of the implications of not having licences on data.

Who is this for? This guide is primarily directed toward members of the research sector, particularly data rights...

Keywords: data, rights, management, licence, licensing, research, policy, guide, training material

ARDC Research Data Rights Management Guide https://dresa.org.au/materials/ardc-research-data-rights-management-guide-149e27b4-fd5e-4739-8e40-be2c5ca6709c A practical guide for people and organisations working with data, about rights information and licences, and to raise awareness of the implications of not having licences on data. Who is this for? This guide is primarily directed toward members of the research sector, particularly data rights holders users and suppliers. Some general reference is made to characteristics and management of government data, acknowledging that this kind of data can be input to the research process. Government readers should consult their agency’s data management policies, in addition to reading this guide. contact@ardc.edu.au Laughlin, Greg (type: Editor) Appleyard, Baden (type: Editor) data, rights, management, licence, licensing, research, policy, guide, training material
ARDC Research Software Rights Management Guide

How researchers may license their research software in order to share it with others.

It addresses the types of open‑source licences, and considerations you (as a researcher) should have in deciding which licence to adopt for sharing.

Keywords: Software citation, Software licensing, Software, research software, licence, License, training material

ARDC Research Software Rights Management Guide https://dresa.org.au/materials/ardc-research-software-rights-management-guide-d147c836-6ba8-4c76-a258-88e4c293569c How researchers may license their research software in order to share it with others. It addresses the types of open‑source licences, and considerations you (as a researcher) should have in deciding which licence to adopt for sharing. contact@ardc.edu.au Laughlin, Greg (type: Editor) Appleyard, Baden (type: Editor) Martinez, Paula Andrea (type: ProjectLeader) Software citation, Software licensing, Software, research software, licence, License, training material
WEBINAR: Getting started with command line bioinformatics

This record includes training materials associated with the Australian BioCommons webinar ‘Getting started with command line bioinformatics’. This webinar took place on 22 June 2021. 

Bioinformatics skills are in demand like never before and biologists are stepping up to the challenge of...

Keywords: Bioinformatics, Command line, Workflows, Bash, Computational biology

WEBINAR: Getting started with command line bioinformatics https://dresa.org.au/materials/webinar-getting-started-with-command-line-bioinformatics-a1426275-7f44-457e-94a3-298d9121fb20 This record includes training materials associated with the Australian BioCommons webinar ‘Getting started with command line bioinformatics’. This webinar took place on 22 June 2021.  Bioinformatics skills are in demand like never before and biologists are stepping up to the challenge of learning to analyse large and ever growing datasets. Learning how to use the command line can open up many options for data analysis but getting started can be a little daunting for those without a background in computer science. Parice Brandies and Carolyn Hogg have recently put together ten simple rules for getting started with command-line bioinformatics to help biologists begin their computational journeys. In this webinar Parice walks you through their hints and tips for getting started with the command line. She covers topics like learning tech speak, evaluating your data and workflows, assessing computational requirements, computing options, the basics of software installation, curating and testing scripts, a bit of bash and keeping good records. The webinar will be followed by a short Q&A session. The slides were created by Parice Brandies and are based on the publication ‘Ten simple rules for getting started with command-line bioinformatics’ (https://doi.org/10.1371/journal.pcbi.1008645). The slides are shared under a Creative Commons Attribution 4.0 International unless otherwise specified and were current at the time of the webinar. **Files and materials included in this record:** - Event metadata (PDF): Information about the event including, description, event URL, learning objectives, prerequisites, technical requirements etc. - Index of training materials (PDF): List and description of all materials associated with this event including the name, format, location and a brief description of each file. - Getting started with command line bioinformatics - slides (PDF): Slides presented during the webinar **Materials shared elsewhere:** A recording of the webinar is available on the Australian BioCommons YouTube Channel https://youtu.be/p7pA4OLB2X4 Melissa Burke (melissa@biocommons.org.au) Hogg, Carolyn (type: Supervisor) Bioinformatics, Command line, Workflows, Bash, Computational biology
ARDC Research Software Rights Management Guide

How researchers may license their research software in order to share it with others.

It addresses the types of open‑source licences, and considerations you (as a researcher) should have in deciding which licence to adopt for sharing.

Keywords: Software citation, Software licensing, Software, research software, licence, License, training material

ARDC Research Software Rights Management Guide https://dresa.org.au/materials/ardc-research-software-rights-management-guide How researchers may license their research software in order to share it with others. It addresses the types of open‑source licences, and considerations you (as a researcher) should have in deciding which licence to adopt for sharing. contact@ardc.edu.au Laughlin, Greg (type: Editor) Appleyard, Baden (type: Editor) Martinez, Paula Andrea (type: ProjectLeader) Software citation, Software licensing, Software, research software, licence, License, training material
ARDC Research Data Rights Management Guide

A practical guide for people and organisations working with data, about rights information and licences, and to raise awareness of the implications of not having licences on data.

Who is this for? This guide is primarily directed toward members of the research sector, particularly data rights...

Keywords: data, rights, management, licence, licensing, research, policy, guide, training material

ARDC Research Data Rights Management Guide https://dresa.org.au/materials/ardc-research-data-rights-management-guide-a5c12e9a-672b-4a42-b9d1-e1315d733aae A practical guide for people and organisations working with data, about rights information and licences, and to raise awareness of the implications of not having licences on data. Who is this for? This guide is primarily directed toward members of the research sector, particularly data rights holders users and suppliers. Some general reference is made to characteristics and management of government data, acknowledging that this kind of data can be input to the research process. Government readers should consult their agency’s data management policies, in addition to reading this guide. contact@ardc.edu.au Laughlin, Greg (type: Editor) Appleyard, Baden (type: Editor) data, rights, management, licence, licensing, research, policy, guide, training material