Species Distribution Modelling in R
This set of scripts and videos provide an introduction to running SDMs in R and include some steps to consider that go beyond what's available in the EcoCommons SDM point-and-click tools.
Five videos include: 1. An introduction to SDM in R, 2. occurrence data, 3. environmental data, 4. fitting...
Keywords: Species Distribution Modelling, Ecology, R software, EcoCommons
Species Distribution Modelling in R
https://www.ecocommons.org.au/educational-material4-mastering-species-distribution-modelling-in-r/
https://dresa.org.au/materials/species-distribution-modelling-in-r
This set of scripts and videos provide an introduction to running SDMs in R and include some steps to consider that go beyond what's available in the EcoCommons SDM point-and-click tools.
Five videos include: 1. An introduction to SDM in R, 2. occurrence data, 3. environmental data, 4. fitting your model, 5. model evaluation
Scripts and files are available here:
https://github.com/EcoCommons-Australia/educational_material/tree/main/SDMs_in_R/Scripts
Scripts for all four modules are here: https://www.ecocommons.org.au/wp-content/uploads/EcoCommons_steps_1_to_4.html
https://www.ecocommons.org.au/contact/
https://orcid.org/0000-0002-1359-5133
Species Distribution Modelling, Ecology, R software, EcoCommons
ugrad
mbr
phd
Introduction to Unix
A hands-on workshop covering the basics of the Unix command line interface.
Knowledge of the Unix operating system is fundamental to the use of many popular bioinformatics command-line tools. Whether you choose to run your analyses locally or on a high-performance computing system, knowing...
Keywords: Unix, Command line, Command-line, CLI
Resource type: tutorial
Introduction to Unix
https://www.melbournebioinformatics.org.au/tutorials/tutorials/unix/unix/
https://dresa.org.au/materials/introduction-to-unix
A hands-on workshop covering the basics of the Unix command line interface.
Knowledge of the Unix operating system is fundamental to the use of many popular bioinformatics command-line tools. Whether you choose to run your analyses locally or on a high-performance computing system, knowing your way around a command-line interface is highly valuable. This workshop will introduce you to Unix concepts by way of a series of hands-on exercises.
This workshop is designed for participants with little or no command-line knowledge.
Tools: Standard Unix commands, FileZilla
Topic overview:
Section 1: Getting started
Section 2: Exploring your current directory
Section 3: Making and changing directories
Section 4: Viewing and manipulating files
Section 5: Removing files and directories
Section 6: Searching files
Section 7: Putting it all together
Section 8: Transferring files
Tutorial instructions available here: https://www.melbournebioinformatics.org.au/tutorials/tutorials/unix/unix/
For queries relating to this workshop, contact Melbourne Bioinformatics (bioinformatics-training@unimelb.edu.au).
Find out when we are next running this training as an in-person workshop, by visiting the Melbourne Bioinformaitcs Eventbrite page: https://www.eventbrite.com.au/o/melbourne-bioinformatics-13058846490
For queries relating to this workshop, contact Melbourne Bioinformatics (bioinformatics-training@unimelb.edu.au).
Morgan, Steven (orcid: 0000-0001-6038-6126)
Unix, Command line, Command-line, CLI
ugrad
masters
mbr
phd
ecr
researcher
support
professional