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6 event found

Keywords: Life science  or Bioinformatics 

  • MEETING: BioChats

    5 July 2022

    MEETING: BioChats https://dresa.org.au/events/meeting-biochats We're inviting all our researcher friends to join us for a regular online chat about life science research, bioinformatics and research infrastructure. It's a 30 min informal drop in session for researchers to share their work, trade secrets, offer tips and hacks, have a whinge - whatever. BioCommons wants to hear from life scientists about their wins and challenges when it comes to doing bioinformatics and research computing so we can help make it better. This week we will be hearing from: Dr Gareth Price, Service Manager Galaxy Australia, QLD Cyber Infrastructure Foundation on '“Code Free" bioinformatics' & Dr Kate Farquharson, Postdoctoral Bioinformatician, University of Sydney on 'Progress and challenges in the bioinformatics of non-model organisms' Please join us at the next BioChat - everyone is welcome! The link to join is here: https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP We have a[ forward schedule of conversation starters](https://docs.google.com/document/d/1BdBYVCAdJ965dazCYS8kj6Hl76T7_P05wJBvKe0gPzo/edit?usp=sharing). We’d love you to[ volunteer a topic for a BioChat](https://docs.google.com/forms/d/e/1FAIpQLSdVX1HdC2w-Z52T4ETITI9Ut37maal9ZGYCpyeM19fbKr4_QQ/viewform). [Register](https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP) anytime to receive joining instructions. 2022-07-05 12:00:00 UTC 2022-07-05 12:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian BioCommons Tiffanie Nelson tiff@biocommons.org.au [] [] 500 meeting open_to_all BioinformaticsCommunity
  • MEETING: International Galaxy Proteomics community

    20 July 2022

    MEETING: International Galaxy Proteomics community https://dresa.org.au/events/meeting-international-galaxy-proteomics-community The Galaxy Proteomics communities in the US, Australia and Europe regularly come together online to talk about topics of shared interest. All are welcome! The next international Galaxy Proteomics meeting will include a presentation on a topic of shared interest. Adam Edwinson (Mayo Clinic, Rochester, MN) will be presenting a talk on “Commensal microbiota-based regulation of intestinal proteolytic activity.” **Next meeting: July 20 2022, 2:00 AM AEST / 6:00 PM CET, 12:00 pm EDT in person at the Galaxy Community Conference!** **The meeting series aims to** 1. Introduce new users to Galaxy 1. Bring the proteomics community together in the context of Galaxy 2. Foster collaboration globally 3. Influence and build on the capabilities of Galaxy for proteomics **Let us know via email if** 1. You would like to attend, and/or 2. You use Galaxy for proteomics and would like to present in a future meeting. Visit the[ rolling meeting agenda](https://docs.google.com/document/d/10lECIsd9tqC4IXWjqcINZDSduKn-1afoN9Q5r7IW8vg/edit) for details on how to join, or send johan@biocommons.org.au a message to receive meeting instructions and updates via email. 2022-07-20 02:00:00 UTC 2022-07-20 03:00:00 UTC Galaxy Proteomics Community Online, Australia Online Australia Australian BiocommonsGalaxy International Community Johan Gustafsson johan@biocommons.org.au [] [] meeting open_to_all BioinformaticsGalaxy ProjectProteomics
  • MEETING: Australian metabolomics community

    26 July 2022

    MEETING: Australian metabolomics community https://dresa.org.au/events/meeting-australian-metabolomics-community Members of the Australian metabolomics community meet regularly to discuss bioinformatics methods and challenges in metabolomics. Everyone is welcome, so if you are interested please join the discussion. _The next meeting will be on the 26th of July 2022_ **The meeting series aims to** 1. Grow a community of metabolomics researchers interested in bioinformatics methods, tools and workflows 2. Provide further opportunities for collaboration within the community 3. Foster knowledge sharing within Australia and where possible also with international peer communities 4. Provide a forum for the BioCommons to continue consulting the metabolomics community regarding their challenges, and how Australian computational infrastructure can be made fit-for-purpose for metabolomics. Visit the[ rolling meeting agenda](https://docs.google.com/document/d/1vatTUWOkksio6qNf9qCVblpDk4G9FK-9WZTyX2_wBoE/edit#heading=h.ad4jz0hlay4q) for details on how to join. To receive joining instructions and updates via email, or keep up to date with events and announcements related to the Australian metabolomics community, you are invited to join the Australian BioCommons[ Metabolomics Community GoogleGroup](https://www.biocommons.org.au/metabolomics-community). 2022-07-26 13:30:00 UTC 2022-07-26 14:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian Biocommons Johan Gustafsson johan@biocommons.org.au [] [] meeting open_to_all MetabolomicsBioinformaticsCommunity
  • MEETING: BioChats

    2 August 2022

    MEETING: BioChats https://dresa.org.au/events/meeting-biochats-e1f3c1fc-a09e-4c34-a6c3-e94d3c413811 We're inviting all our researcher friends to join us for a regular online chat about life science research, bioinformatics and research infrastructure. It's a 30 min informal drop in session for researchers to share their work, trade secrets, offer tips and hacks, have a whinge - whatever. BioCommons wants to hear from life scientists about their wins and challenges when it comes to doing bioinformatics and research computing so we can help make it better. This month we will be hearing from Dr Anna Syme, Bioinformatician, Melbourne Bioinformatics on 'Genomes - what are they good for?" & Ms Jess Chung, Bioinformatician, Melbourne Bioinformatics on 'Direct-to-Consumer Genomic Sequencing Considerations' Please join us at the next BioChat - everyone is welcome! We have a[ forward schedule of conversation starters](https://docs.google.com/document/d/1BdBYVCAdJ965dazCYS8kj6Hl76T7_P05wJBvKe0gPzo/edit?usp=sharing). We’d love you to[ volunteer a topic for a BioChat](https://docs.google.com/forms/d/e/1FAIpQLSdVX1HdC2w-Z52T4ETITI9Ut37maal9ZGYCpyeM19fbKr4_QQ/viewform). [Register](https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP) anytime to receive joining instructions. 2022-08-02 12:00:00 UTC 2022-08-02 12:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian BioCommons Tiffanie Nelson tiff@biocommons.org.au [] [] 500 meeting open_to_all BioinformaticsCommunity
  • WEBINAR: Getting started with whole genome mapping and variant calling on the command line

    24 August 2022

    WEBINAR: Getting started with whole genome mapping and variant calling on the command line https://dresa.org.au/events/webinar-getting-started-with-whole-genome-mapping-and-variant-calling-on-the-command-line Life scientists are increasingly using whole genome sequencing (WGS) to ask and answer research questions across the tree of life. Before any of this work can be done, there is the essential but challenging task of processing raw sequencing data. Processing WGS data is a computationally challenging, multi-step process used to create a map of an individual’s genome and identify genetic variant sites. The tools you use in this process and overall workflow design can look very different for different researchers, it all depends on your dataset and the research questions you’re asking. Luckily, there are lots of existing WGS processing tools and pipelines out there, but knowing where to start and what your specific needs are is hard work, no matter how experienced you are. In this webinar we will walk through the essential steps and considerations for researchers who are running and building reproducible WGS mapping and variant calling pipelines at the command line interface. We will discuss how to choose and evaluate a pipeline that is right for your dataset and research questions, and how to get access to the compute resources you need. **Who the webinar is for** This webinar is intended for life scientists who are using and building whole genome sequencing mapping and variant calling pipelines. Some familiarity with the concepts of whole genome sequencing is recommended. **Presenter:** Dr Georgina Samaha, Sydney Informatics Hub, University of Sydney **Date/time:** 24 August 2021 - 12:00-13:00 AEST / 11:30 - 12:30 ACST / 10:00-11:00 AWST **How to join:** This webinar is free to join but you must register for a place in advance. **[Register here] (https://unimelb.zoom.us/webinar/register/WN_ekHib2_2QYazaH06VFMPgQ)** 2022-08-24 12:00:00 UTC 2022-08-24 13:00:00 UTC Australian BioCommons Online, Australia Online Australia Australian Biocommons training@biocommons.org.au [] [] 500 webinar open_to_all BioinformaticsworkflowsWhole genome sequencingVariant callingSequence mapping
  • MEETING: BioChats

    6 September 2022

    MEETING: BioChats https://dresa.org.au/events/meeting-biochats-2c842e85-7f7c-462d-8372-c0af5732a80e We're inviting all our researcher friends to join us for a regular online chat about life science research, bioinformatics and research infrastructure. It's a 30 min informal drop in session for researchers to share their work, trade secrets, offer tips and hacks, have a whinge - whatever. BioCommons wants to hear from life scientists about their wins and challenges when it comes to doing bioinformatics and research computing so we can help make it better. Please join us at the next BioChat - everyone is welcome! We have a[ forward schedule of conversation starters](https://docs.google.com/document/d/1BdBYVCAdJ965dazCYS8kj6Hl76T7_P05wJBvKe0gPzo/edit?usp=sharing). We’d love you to[ volunteer a topic for a BioChat](https://docs.google.com/forms/d/e/1FAIpQLSdVX1HdC2w-Z52T4ETITI9Ut37maal9ZGYCpyeM19fbKr4_QQ/viewform). [Register](https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP) anytime to receive joining instructions. 2022-09-06 12:00:00 UTC 2022-09-06 12:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian BioCommons Tiffanie Nelson tiff@biocommons.org.au [] [] 500 meeting open_to_all BioinformaticsCommunity
  • MEETING: BioChats

    5 July 2022

    MEETING: BioChats https://dresa.org.au/events/meeting-biochats We're inviting all our researcher friends to join us for a regular online chat about life science research, bioinformatics and research infrastructure. It's a 30 min informal drop in session for researchers to share their work, trade secrets, offer tips and hacks, have a whinge - whatever. BioCommons wants to hear from life scientists about their wins and challenges when it comes to doing bioinformatics and research computing so we can help make it better. This week we will be hearing from: Dr Gareth Price, Service Manager Galaxy Australia, QLD Cyber Infrastructure Foundation on '“Code Free" bioinformatics' & Dr Kate Farquharson, Postdoctoral Bioinformatician, University of Sydney on 'Progress and challenges in the bioinformatics of non-model organisms' Please join us at the next BioChat - everyone is welcome! The link to join is here: https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP We have a[ forward schedule of conversation starters](https://docs.google.com/document/d/1BdBYVCAdJ965dazCYS8kj6Hl76T7_P05wJBvKe0gPzo/edit?usp=sharing). We’d love you to[ volunteer a topic for a BioChat](https://docs.google.com/forms/d/e/1FAIpQLSdVX1HdC2w-Z52T4ETITI9Ut37maal9ZGYCpyeM19fbKr4_QQ/viewform). [Register](https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP) anytime to receive joining instructions. 2022-07-05 12:00:00 UTC 2022-07-05 12:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian BioCommons Tiffanie Nelson tiff@biocommons.org.au [] [] 500 meeting open_to_all BioinformaticsCommunity
  • MEETING: International Galaxy Proteomics community

    20 July 2022

    MEETING: International Galaxy Proteomics community https://dresa.org.au/events/meeting-international-galaxy-proteomics-community The Galaxy Proteomics communities in the US, Australia and Europe regularly come together online to talk about topics of shared interest. All are welcome! The next international Galaxy Proteomics meeting will include a presentation on a topic of shared interest. Adam Edwinson (Mayo Clinic, Rochester, MN) will be presenting a talk on “Commensal microbiota-based regulation of intestinal proteolytic activity.” **Next meeting: July 20 2022, 2:00 AM AEST / 6:00 PM CET, 12:00 pm EDT in person at the Galaxy Community Conference!** **The meeting series aims to** 1. Introduce new users to Galaxy 1. Bring the proteomics community together in the context of Galaxy 2. Foster collaboration globally 3. Influence and build on the capabilities of Galaxy for proteomics **Let us know via email if** 1. You would like to attend, and/or 2. You use Galaxy for proteomics and would like to present in a future meeting. Visit the[ rolling meeting agenda](https://docs.google.com/document/d/10lECIsd9tqC4IXWjqcINZDSduKn-1afoN9Q5r7IW8vg/edit) for details on how to join, or send johan@biocommons.org.au a message to receive meeting instructions and updates via email. 2022-07-20 02:00:00 UTC 2022-07-20 03:00:00 UTC Galaxy Proteomics Community Online, Australia Online Australia Australian BiocommonsGalaxy International Community Johan Gustafsson johan@biocommons.org.au [] [] meeting open_to_all BioinformaticsGalaxy ProjectProteomics
  • MEETING: Australian metabolomics community

    26 July 2022

    MEETING: Australian metabolomics community https://dresa.org.au/events/meeting-australian-metabolomics-community Members of the Australian metabolomics community meet regularly to discuss bioinformatics methods and challenges in metabolomics. Everyone is welcome, so if you are interested please join the discussion. _The next meeting will be on the 26th of July 2022_ **The meeting series aims to** 1. Grow a community of metabolomics researchers interested in bioinformatics methods, tools and workflows 2. Provide further opportunities for collaboration within the community 3. Foster knowledge sharing within Australia and where possible also with international peer communities 4. Provide a forum for the BioCommons to continue consulting the metabolomics community regarding their challenges, and how Australian computational infrastructure can be made fit-for-purpose for metabolomics. Visit the[ rolling meeting agenda](https://docs.google.com/document/d/1vatTUWOkksio6qNf9qCVblpDk4G9FK-9WZTyX2_wBoE/edit#heading=h.ad4jz0hlay4q) for details on how to join. To receive joining instructions and updates via email, or keep up to date with events and announcements related to the Australian metabolomics community, you are invited to join the Australian BioCommons[ Metabolomics Community GoogleGroup](https://www.biocommons.org.au/metabolomics-community). 2022-07-26 13:30:00 UTC 2022-07-26 14:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian Biocommons Johan Gustafsson johan@biocommons.org.au [] [] meeting open_to_all MetabolomicsBioinformaticsCommunity
  • MEETING: BioChats

    2 August 2022

    MEETING: BioChats https://dresa.org.au/events/meeting-biochats-e1f3c1fc-a09e-4c34-a6c3-e94d3c413811 We're inviting all our researcher friends to join us for a regular online chat about life science research, bioinformatics and research infrastructure. It's a 30 min informal drop in session for researchers to share their work, trade secrets, offer tips and hacks, have a whinge - whatever. BioCommons wants to hear from life scientists about their wins and challenges when it comes to doing bioinformatics and research computing so we can help make it better. This month we will be hearing from Dr Anna Syme, Bioinformatician, Melbourne Bioinformatics on 'Genomes - what are they good for?" & Ms Jess Chung, Bioinformatician, Melbourne Bioinformatics on 'Direct-to-Consumer Genomic Sequencing Considerations' Please join us at the next BioChat - everyone is welcome! We have a[ forward schedule of conversation starters](https://docs.google.com/document/d/1BdBYVCAdJ965dazCYS8kj6Hl76T7_P05wJBvKe0gPzo/edit?usp=sharing). We’d love you to[ volunteer a topic for a BioChat](https://docs.google.com/forms/d/e/1FAIpQLSdVX1HdC2w-Z52T4ETITI9Ut37maal9ZGYCpyeM19fbKr4_QQ/viewform). [Register](https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP) anytime to receive joining instructions. 2022-08-02 12:00:00 UTC 2022-08-02 12:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian BioCommons Tiffanie Nelson tiff@biocommons.org.au [] [] 500 meeting open_to_all BioinformaticsCommunity
  • WEBINAR: Getting started with whole genome mapping and variant calling on the command line

    24 August 2022

    WEBINAR: Getting started with whole genome mapping and variant calling on the command line https://dresa.org.au/events/webinar-getting-started-with-whole-genome-mapping-and-variant-calling-on-the-command-line Life scientists are increasingly using whole genome sequencing (WGS) to ask and answer research questions across the tree of life. Before any of this work can be done, there is the essential but challenging task of processing raw sequencing data. Processing WGS data is a computationally challenging, multi-step process used to create a map of an individual’s genome and identify genetic variant sites. The tools you use in this process and overall workflow design can look very different for different researchers, it all depends on your dataset and the research questions you’re asking. Luckily, there are lots of existing WGS processing tools and pipelines out there, but knowing where to start and what your specific needs are is hard work, no matter how experienced you are. In this webinar we will walk through the essential steps and considerations for researchers who are running and building reproducible WGS mapping and variant calling pipelines at the command line interface. We will discuss how to choose and evaluate a pipeline that is right for your dataset and research questions, and how to get access to the compute resources you need. **Who the webinar is for** This webinar is intended for life scientists who are using and building whole genome sequencing mapping and variant calling pipelines. Some familiarity with the concepts of whole genome sequencing is recommended. **Presenter:** Dr Georgina Samaha, Sydney Informatics Hub, University of Sydney **Date/time:** 24 August 2021 - 12:00-13:00 AEST / 11:30 - 12:30 ACST / 10:00-11:00 AWST **How to join:** This webinar is free to join but you must register for a place in advance. **[Register here] (https://unimelb.zoom.us/webinar/register/WN_ekHib2_2QYazaH06VFMPgQ)** 2022-08-24 12:00:00 UTC 2022-08-24 13:00:00 UTC Australian BioCommons Online, Australia Online Australia Australian Biocommons training@biocommons.org.au [] [] 500 webinar open_to_all BioinformaticsworkflowsWhole genome sequencingVariant callingSequence mapping
  • MEETING: BioChats

    6 September 2022

    MEETING: BioChats https://dresa.org.au/events/meeting-biochats-2c842e85-7f7c-462d-8372-c0af5732a80e We're inviting all our researcher friends to join us for a regular online chat about life science research, bioinformatics and research infrastructure. It's a 30 min informal drop in session for researchers to share their work, trade secrets, offer tips and hacks, have a whinge - whatever. BioCommons wants to hear from life scientists about their wins and challenges when it comes to doing bioinformatics and research computing so we can help make it better. Please join us at the next BioChat - everyone is welcome! We have a[ forward schedule of conversation starters](https://docs.google.com/document/d/1BdBYVCAdJ965dazCYS8kj6Hl76T7_P05wJBvKe0gPzo/edit?usp=sharing). We’d love you to[ volunteer a topic for a BioChat](https://docs.google.com/forms/d/e/1FAIpQLSdVX1HdC2w-Z52T4ETITI9Ut37maal9ZGYCpyeM19fbKr4_QQ/viewform). [Register](https://aarnet.zoom.us/meeting/register/tZcof-msqTosHNXqzjwfLqD4MrTbNH3hRkQP) anytime to receive joining instructions. 2022-09-06 12:00:00 UTC 2022-09-06 12:30:00 UTC Australian BioCommons Online, Australia Online Australia Australian BioCommons Tiffanie Nelson tiff@biocommons.org.au [] [] 500 meeting open_to_all BioinformaticsCommunity

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