Register event
6 event found

Content provider: Melbourne Bioinformatics 

  • Introduction to R for biologists

    28 September 2022

    North Melbourne, Australia

    Introduction to R for biologists https://dresa.org.au/events/introduction-to-r-for-biologists This workshop has been developed collaboratively by training specialists at Peter MacCallum Cancer Center and Melbourne Bioinformatics. This introduction to R and RStudio will provide beginners with experience with loading, manipulating and visualising biological data using the tidyverse collection of R packages. The example data used is publicly available RNA-seq data, therefore attendees will gain experience in the structure and appearance of RNA-seq data. 2022-09-28 10:00:00 UTC 2022-09-28 13:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of Melbourne bioinformatics-training@unimelb.edu.au [] beginnersLife scientists planning or running single cell RNAseq experiments (or mining public data), who want to perform their own analyses.Researchers and research students, or anyone who wants to learn intermediate statistical concepts to apply in R. 20 workshop host_institution RIntroductoryRNASeq
  • Introduction to UNIX

    4 October 2022

    North Melbourne, Australia

    Introduction to UNIX https://dresa.org.au/events/introduction-to-unix-9a3165bd-34a3-4870-94e4-4c2e1f8b4d26 Knowledge of the Unix operating system is fundamental to the use of many popular bioinformatics command-line tools. Whether you choose to run your analyses locally or on an HPC system, knowing your way around a command-line interface is highly valuable. This workshop will introduce you to Unix concepts by way of a series of hands-on exercises. Completion of this workshop will provide the background knowledge required for other Melbourne Bioinformatics workshops that require command-line skills. 2022-10-04 10:00:00 UTC 2022-10-04 14:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of Melbourne bioinformatics-training@unimelb.edu.au [] beginners 20 workshop host_institution Unix
  • QIIME2 analysis of 16S rRNA

    6 October 2022

    North Melbourne, Australia

    QIIME2 analysis of 16S rRNA https://dresa.org.au/events/qiime2-analysis-of-16s-rrna This workshop will give you an introduction to the QIIME2 analysis platform using 16S rRNA amplicon data from coral-associated bacteria. 2022-10-06 10:00:00 UTC 2022-10-06 14:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of MelbourneMelbourne Bioinformatics bioinformatics-training@unimelb.edu.au [] researcherspeople with command line experience 20 workshop host_institution Qiime2Metabarcoding
  • Variant calling using GATK4 command line workflow

    19 October 2022

    North Melbourne, Australia

    Variant calling using GATK4 command line workflow https://dresa.org.au/events/variant-calling-using-gatk4-command-line-workflow This workshop aims to introduce participants to variant calling using command line applications. The material follows the GATK variant calling best practices workflow and provides an introduction to tools, datatypes and file formats associated with variant calling. The workshop will use a test llumina sequencing dataset to progress through the workflow from aligning sequencing reads to a reference genome before applying the GATK best practices workflow to call genetic variants (SNVs and Indels) in test data. 2022-10-19 10:00:00 UTC 2022-10-19 14:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of MelbourneMelbourne Bioinformatics bioinformatics-training@unimelb.edu.au [] Researchers and research students, or anyone who wants to learn intermediate statistical concepts to apply in R. 20 [] host_institution Variant callingGATK4
  • Introduction to Workflow Languages

    20 October 2022

    North Melbourne, Australia

    Introduction to Workflow Languages https://dresa.org.au/events/introduction-to-workflow-languages This workshop demonstrates how to write workflows using a workflow language. An introduction to workflow theory, implementation using the CWL language, and execution on a compute environment will be demonstrated. By the end of the session, participants will be able to write and execute basic workflows in CWL. Participants will also gain experience migrating an existing workflow from one system (Galaxy) to another (CWL). Skills learned will be easily transferable to other workflow languages (eg Nextflow) participants may want to learn in the future. 2022-10-20 10:00:00 UTC 2022-10-20 15:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of MelbourneMelbourne Bioinformatics bioinformatics-training@unimelb.edu.au [] researchersbioinformatitions 20 workshop host_institution CWLWorkflows
  • Introduction to R for biologists

    27 October 2022

    North Melbourne, Australia

    Introduction to R for biologists https://dresa.org.au/events/introduction-to-r-for-biologists-49a52478-709d-4e02-8361-e891f7fcab67 This workshop has been developed collaboratively by training specialists at Peter MacCallum Cancer Center and Melbourne Bioinformatics. This introduction to R and RStudio will provide beginners with experience with loading, manipulating and visualising biological data using the tidyverse collection of R packages. The example data used is publicly available RNA-seq data, therefore attendees will gain experience in the structure and appearance of RNA-seq data. 2022-10-27 10:00:00 UTC 2022-10-27 13:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of Melbourne bioinformatics-training@unimelb.edu.au [] beginnersLife scientists planning or running single cell RNAseq experiments (or mining public data), who want to perform their own analyses.Researchers and research students, or anyone who wants to learn intermediate statistical concepts to apply in R. 20 workshop host_institution RIntroductoryRNASeq
  • Introduction to R for biologists

    28 September 2022

    North Melbourne, Australia

    Introduction to R for biologists https://dresa.org.au/events/introduction-to-r-for-biologists This workshop has been developed collaboratively by training specialists at Peter MacCallum Cancer Center and Melbourne Bioinformatics. This introduction to R and RStudio will provide beginners with experience with loading, manipulating and visualising biological data using the tidyverse collection of R packages. The example data used is publicly available RNA-seq data, therefore attendees will gain experience in the structure and appearance of RNA-seq data. 2022-09-28 10:00:00 UTC 2022-09-28 13:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of Melbourne bioinformatics-training@unimelb.edu.au [] beginnersLife scientists planning or running single cell RNAseq experiments (or mining public data), who want to perform their own analyses.Researchers and research students, or anyone who wants to learn intermediate statistical concepts to apply in R. 20 workshop host_institution RIntroductoryRNASeq
  • Introduction to UNIX

    4 October 2022

    North Melbourne, Australia

    Introduction to UNIX https://dresa.org.au/events/introduction-to-unix-9a3165bd-34a3-4870-94e4-4c2e1f8b4d26 Knowledge of the Unix operating system is fundamental to the use of many popular bioinformatics command-line tools. Whether you choose to run your analyses locally or on an HPC system, knowing your way around a command-line interface is highly valuable. This workshop will introduce you to Unix concepts by way of a series of hands-on exercises. Completion of this workshop will provide the background knowledge required for other Melbourne Bioinformatics workshops that require command-line skills. 2022-10-04 10:00:00 UTC 2022-10-04 14:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of Melbourne bioinformatics-training@unimelb.edu.au [] beginners 20 workshop host_institution Unix
  • QIIME2 analysis of 16S rRNA

    6 October 2022

    North Melbourne, Australia

    QIIME2 analysis of 16S rRNA https://dresa.org.au/events/qiime2-analysis-of-16s-rrna This workshop will give you an introduction to the QIIME2 analysis platform using 16S rRNA amplicon data from coral-associated bacteria. 2022-10-06 10:00:00 UTC 2022-10-06 14:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of MelbourneMelbourne Bioinformatics bioinformatics-training@unimelb.edu.au [] researcherspeople with command line experience 20 workshop host_institution Qiime2Metabarcoding
  • Variant calling using GATK4 command line workflow

    19 October 2022

    North Melbourne, Australia

    Variant calling using GATK4 command line workflow https://dresa.org.au/events/variant-calling-using-gatk4-command-line-workflow This workshop aims to introduce participants to variant calling using command line applications. The material follows the GATK variant calling best practices workflow and provides an introduction to tools, datatypes and file formats associated with variant calling. The workshop will use a test llumina sequencing dataset to progress through the workflow from aligning sequencing reads to a reference genome before applying the GATK best practices workflow to call genetic variants (SNVs and Indels) in test data. 2022-10-19 10:00:00 UTC 2022-10-19 14:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of MelbourneMelbourne Bioinformatics bioinformatics-training@unimelb.edu.au [] Researchers and research students, or anyone who wants to learn intermediate statistical concepts to apply in R. 20 [] host_institution Variant callingGATK4
  • Introduction to Workflow Languages

    20 October 2022

    North Melbourne, Australia

    Introduction to Workflow Languages https://dresa.org.au/events/introduction-to-workflow-languages This workshop demonstrates how to write workflows using a workflow language. An introduction to workflow theory, implementation using the CWL language, and execution on a compute environment will be demonstrated. By the end of the session, participants will be able to write and execute basic workflows in CWL. Participants will also gain experience migrating an existing workflow from one system (Galaxy) to another (CWL). Skills learned will be easily transferable to other workflow languages (eg Nextflow) participants may want to learn in the future. 2022-10-20 10:00:00 UTC 2022-10-20 15:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of MelbourneMelbourne Bioinformatics bioinformatics-training@unimelb.edu.au [] researchersbioinformatitions 20 workshop host_institution CWLWorkflows
  • Introduction to R for biologists

    27 October 2022

    North Melbourne, Australia

    Introduction to R for biologists https://dresa.org.au/events/introduction-to-r-for-biologists-49a52478-709d-4e02-8361-e891f7fcab67 This workshop has been developed collaboratively by training specialists at Peter MacCallum Cancer Center and Melbourne Bioinformatics. This introduction to R and RStudio will provide beginners with experience with loading, manipulating and visualising biological data using the tidyverse collection of R packages. The example data used is publicly available RNA-seq data, therefore attendees will gain experience in the structure and appearance of RNA-seq data. 2022-10-27 10:00:00 UTC 2022-10-27 13:00:00 UTC Melbourne Bioinformatics 21 Bedford Street, North Melbourne, Australia 21 Bedford Street North Melbourne Australia 3051 University of Melbourne bioinformatics-training@unimelb.edu.au [] beginnersLife scientists planning or running single cell RNAseq experiments (or mining public data), who want to perform their own analyses.Researchers and research students, or anyone who wants to learn intermediate statistical concepts to apply in R. 20 workshop host_institution RIntroductoryRNASeq

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