Description:

Join International Nextflow expert Chris Hakkaart from Seqera for an in-person, interactive workshop on building Nextflow pipelines.

Chris will share best practices he and Seqera have gleaned over years of working with users across domains. Chris will be joined by local Seqera engineer, Marco De La Pierre.

This workshop is in-person only at the Pawsey Centre and is free for participants.

There is limited seating, so please register ONLY if you plan to attend for the entire day. Please arrive at 8:30am AWST to sign onto the system. Training starts promptly at 9:00am (AWST).

Start: Tuesday, 12 December 2023 @ 08:30

End: Tuesday, 12 December 2023 @ 16:00

Duration: 7 hours

Timezone: Perth

Venue: 1 Bryce Ave

City: Kensington  Country: Australia  Postcode: 6151

Prerequisites:

Familiarity with the command line
Such as understanding of file paths and basic command line functions (See this 30 min refresher from Pawsey)
Familiarity with developing Nextflow pipelines
Such as understanding the structure of a Nextflow workflow and process block.
Have a Github account

Eligibility:
  • Open to all

Organiser: Pawsey Supercomputing Research Center

Contact: training@pawsey.org.au

Host institution: Pawsey Supercomputing Research Centre, Pawsey

Keywords: Nextflow, GPU, CPUs, workflows, Pipelines

Event type:
  • Workshop

Cost Basis: Free to all

Best Practices for Building Nextflow Pipelines https://dresa.org.au/events/best-practices-for-building-nextflow-pipelines Join International Nextflow expert Chris Hakkaart from Seqera for an in-person, interactive workshop on building Nextflow pipelines. Chris will share best practices he and Seqera have gleaned over years of working with users across domains. Chris will be joined by local Seqera engineer, Marco De La Pierre. This workshop is in-person only at the Pawsey Centre and is free for participants. There is limited seating, so please register ONLY if you plan to attend for the entire day. Please arrive at 8:30am AWST to sign onto the system. Training starts promptly at 9:00am (AWST). 2023-12-12 08:30:00 UTC 2023-12-12 16:00:00 UTC Pawsey Supercomputing Research Center 1 Bryce Ave, Kensington, Australia 1 Bryce Ave Kensington Australia 6151 Pawsey Supercomputing Research CentrePawsey training@pawsey.org.au [] [] workshop open_to_all NextflowGPUCPUsworkflowsPipelines